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Axis Title menu layout

Click on the axis title to open the Axis Title menu. This offers several functionalities, as shown below, enabling users to visualize data in a way that best aligns with their objectives.

Axis Title Menu Updated- final

Split Axis

To view multiple data sets simultaneously, such as different marker types or genes aligned against the same genome or chromosome, the split axis feature is very useful. To enable it, click on the axis menu layout, select the downward-slanting arrow, and close the menu by clicking the cross in the top right corner.

Split axis could be done either before or after adding datasets to the axis.

2a-split-axis

Zooming the axis

Upon zooming in the axis (Click and drag) the representation of individual features transitions from a histogram to a more distinct fingerprint view.

2b-split-axis-zoom-in

Viewing the features

Selecting an individual fingerprint band allows the user to view the feature's location, represented by an arrow, and selecting the arrow displays the feature name.

2c-split-axis-add-feature

Clicking the feature arrow hides the feature name, and selecting the fingerprint band again hides the feature entirely.

2d-split-axis-remove-feature

Note

Deselect any displayed feature to ensure it is not automatically displayed the next time the same dataset is opened.

Flip Axis

To flip or invert the axis, open the Axis Title menu and select the icon with up and down pointing arrows. See the image below for a visual representation.

3-flip-axis

basic-function_axis-flip-orientation

Removing Datasets from visualization

Open the Axis Title menu and click the cross icon next to a specific dataset to remove it from the displayed view.

5a  remove selected dataset

To remove all datasets from view, open the Axis Title menu and click the cross icon located above the axis name.

5b  Removing all datasets

Rename Axis title

To rename the axis title, open the Axis Title menu and click the pen icon to access the text bar. Enter a new axis title that aligns with your objective.

4 rename

Display and hide features of a dataset

Open the Axis Title menu and click the eye icon to toggle the display of a particular dataset, showing or hiding it from view.

6a-hide-features

6b-display-features

Requested features vs total features of a dataset

Note

This is an advanced feature used to debug technical issues with Pretzel. It is a technical counter that tracks the number of features requested from the backend.

7Requested feature vs total feature